Henderson-Hasselbalch Calculators
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Henderson-Hasselbalch Equation
pH = pKa + log([A⁻]/[HA])
Rearranged: [A⁻]/[HA] = 10^(pH − pKa)
At pH = pKa: log(1) = 0; [A⁻] = [HA] (50% dissociated). At pH = pKa + 1: [A⁻]/[HA] = 10 (91% dissociated). At pH = pKa − 1: [A⁻]/[HA] = 0.1 (9% dissociated).
Buffer Design Applications
Choose a buffer with pKa within ±1 pH unit of your target pH. Calculate ratio: [A⁻]/[HA] = 10^(pH − pKa). Example: prepare pH 6.0 buffer using acetate (pKa = 4.75): ratio = 10^(6.0 − 4.75) = 10^1.25 = 17.8. Mix sodium acetate:acetic acid = 17.8:1 → at this ratio, pH ≈ 6.0. Note: pH 6.0 is 1.25 units above the pKa — borderline of the effective buffering range (±1 unit). A better choice for pH 6.0 is MES (pKa 6.15) or citrate/phosphate.
Amino Acid Ionization
Predict ionization state at physiological pH 7.4: His side chain (imidazole, pKa ~6.0): [A⁻]/[HA] = 10^(7.4 − 6.0) = 10^1.4 = 25; 96% neutral, 4% protonated (cationic) at pH 7.4. Lys (pKa ~10.5): [A⁻]/[HA] = 10^(7.4 − 10.5) = 10^(−3.1) = 0.00079; >99.9% protonated (cationic) at physiological pH.
Limitations
Assumes ideal dilute solution; concentration effects at high ionic strength require activity corrections; less accurate when [A⁻] or [HA] is very low relative to Kw.
Glossary
Frequently Asked Questions
Henderson-Hasselbalch: pH = pKa + log([A⁻]/[HA]). Derivation: from the acid dissociation equilibrium Ka = [H⁺][A⁻]/[HA]; solve for [H⁺]: [H⁺] = Ka × [HA]/[A⁻]; take −log of both sides: pH = −log(Ka) − log([HA]/[A⁻]) = pKa + log([A⁻]/[HA]). The equation is valid for any weak acid/conjugate base pair and tells you: (1) At what pH the acid is half-dissociated (pH = pKa). (2) What ratio of conjugate base to acid to use for a target pH. (3) What fraction of a weak acid is ionized at any given pH.
Steps: (1) Choose a weak acid with pKa within ±1 pH unit of target pH. (2) Calculate [A⁻]/[HA] ratio = 10^(target pH − pKa). (3) Mix the weak acid and its conjugate base (sodium salt) in this ratio at the desired total buffer concentration. (4) Check and adjust pH with calibrated pH meter; fine-tune with HCl or NaOH. Example: HEPES buffer at pH 7.5; pKa = 7.48. Ratio = 10^(7.5−7.48) = 10^0.02 = 1.047. Mix HEPES free acid : sodium HEPES ≈ 1:1.047 ≈ almost equal amounts. Total concentration 50 mM: ~24.4 mM acid + ~25.6 mM base.
Fraction ionized = [A⁻]/([A⁻] + [HA]) = 1/(1 + 10^(pKa−pH)). Fraction protonated = [HA]/([A⁻] + [HA]) = 1/(1 + 10^(pH−pKa)). Example: aspirin (acetylsalicylic acid, pKa = 3.5) in the stomach (pH 1.5): fraction ionized = 1/(1 + 10^(3.5−1.5)) = 1/(1 + 100) = 0.0099 ≈ 1%. So 99% is in the protonated (uncharged, lipid-soluble) form → absorbed across gastric mucosa. At intestinal pH 7.0: fraction ionized = 1/(1 + 10^(3.5−7.0)) = 1/(1 + 10^(−3.5)) = 1/1.000316 ≈ >99% ionized → poor absorption through lipid membranes.
Blood pH regulation uses the bicarbonate buffer system: CO₂(dissolved) + H₂O ⇌ H₂CO₃ ⇌ H⁺ + HCO₃⁻. Henderson-Hasselbalch: pH = 6.1 + log([HCO₃⁻] / 0.03 × PCO₂). At normal blood values: [HCO₃⁻] = 24 mEq/L; PCO₂ = 40 mmHg; [CO₂]_dissolved = 0.03 × 40 = 1.2 mM. pH = 6.1 + log(24/1.2) = 6.1 + log(20) = 6.1 + 1.301 = 7.40. Lungs control PCO₂ (acid component); kidneys control [HCO₃⁻] (base component). In respiratory acidosis (elevated PCO₂): denominator increases → ratio decreases → pH falls. In metabolic alkalosis (elevated [HCO₃⁻]): numerator increases → ratio increases → pH rises.